Nucleic Acids and Protein Content as a Measure to Evaluate the Nutritional Condition of Japanese FlounderParalichthys olivaceus Larvae and Juveniles
The University of Georgia Marine Institute
Sapelo Island, Georgia 31327
USA
Email: gwakws@arches.uga.edu
Abstract
Recently developed fluorescence techniques were used to quantify RNA and DNA content in the whole body of fed and starved hatchery-reared larval and juvenile Japanese flounder. RNA/DNA ratios in wild larvae and juveniles were concurrently measured to evaluate their nutritional condition. Significant differences in the RNA/DNA ratios were found between fed and starved fish, and appeared to expand drastically as starvation proceeded. Even in the fed fish marked fluctuations in its ratios during metamorphosis were observed, evident by decreasing from late metamorphic to post-metamorphic stages. The changes in protein content coincided well with RNA content. Protein/DNA ratio also peaked at the post-metamorphic phase and decreased for several days thereafter, suggesting an occurrence of hypertrophy until the post-metamorphic phase followed by hyperplasia. Using the criteria established from these laboratory experiments, the nutritional conditions of wild Japanese flounder larvae and juveniles collected in Wakasa Bay in 1994 and 1995 were determined by measuring RNA and DNA. Starved fish were mainly found at stage I (settling stage) fish during the late season of settlement in 1995. The present study demonstrates the usefulness of RNA/DNA ratios and protein content for assessment of the nutritional condition of hatchery-reared and wild Japanese flounder larvae and juveniles.
Japanese flounder Paralichthys olivaceus is a commercially important species for mariculture and stock enhancement as well as coastal fisheries in Japan. Although a large variety of work has been done on the early life stages of Japanese flounder (Minami, 1982; Seikai et al., 1986; Fukuhara, 1986), less is known about the mechanisms of its mortality in the sea (Tanaka et al., 1989a). Hjort (1914) first proposed the critical period hypothesis, whereby the year class size in most marine fish species hatched from small pelagic eggs could be determined primarily from high mortality rates during early life stages. Consequently, small changes of survival rate during this time can give rise to high variability in recruitment (Sale, 1990; Fogarty, 1993). Over the years, laboratory studies have mainly focused on mortality during the first feeding stage of marine fish larvae (May 1974). More recently, however, several papers have begun to address the metamorphic phase of fish development as a critical period for survival (Thorisson, 1994). Recent works in flatfish particularly have tried to elucidate the possibility of a second severe mortality event during the post-metamorphic phase of settlement (Tanaka et al., 1989a; Phil, 1990; Keefe and Able, 1993). Thus, the early larval stage would be a crucial period for survival and potential occurrence of another species-specific critical period can be predicted in association with metamorphosis in the Japanese flounder.
A variety of techniques such as morphometric, histological, and biochemical analyses for diagnosing the nutritional condition of fish larvae and juveniles have been developed and applied to both hatchery-reared and wild fish (Buckley, 1979; Yin and Blaxter, 1986; Clemmesen, 1987; 1988; Theilacker and Watanabe, 1989). Biochemical analysis, which determines the quantities of chemical constituents that serve as energy substrates, could be one of the indicative measures to show changes of nutritional conditions. Among the biochemical indices, the ratio of RNA to DNA has been proven a reliable indicator of nutritional condition (Buckley, 1979; 1980) and growth of larval and juvenile fish (Bulow, 1970). Tanangonan et al. (1998) did preliminary studies of biochemical changes for hatchery-reared Japanese flounder. However, more detailed experiments are needed to assess nutritional condition of Japanese flounder associated with development and apply the biochemical criterion to the wild fish.
In the present study the RNA, DNA, and protein content of wild and hatchery-reared larval and juvenile Japanese flounder are investigated to evaluate nutritional condition and the usefulness of such techniques.
Japanese flounder larvae and juveniles were reared at the Fisheries Research Station of Kyoto University, Maizuru, Japan, in April and May 1994. Fertilized eggs, provided by the Japan Sea Farming Association (Miyazu Station), were stocked into 500-L polycarbonate tanks, and maintained at 15 C using running seawater. Within six hours of stocking, water temperature was raised to an average of 18 C using heating rods connected to a thermostat. Larval rearing was conducted under natural photoperiod conditions. The larvae were fed rotifers (Brachionus plicatilis) cultured with Nannochloropsis oculata at three days after hatching (DAH), and brine shrimp (Artemia salina nauplii) enriched with squid liver oil at 20 DAH. Rotifers were provided at a density of five ml–1 until 28 DAH, and brine shrimp were given until 43 DAH at a density of one to six ml–1 every morning.
In Experiment (Exp.) 1 RNA/DNA ratios showed large fluctuations at stages G, H, and I due to failure in determining the sample amount from the homogenized one. In order to confirm the values of RNA/DNA ratios at specific stages during metamorphosis, a supplemental, second experiment was performed under almost identical rearing conditions as the first. Experiment 2 lasted for 15 days between the early-metamorphosing stage (F) and eight days after settlement (I8).
To reconfirm the changes in RNA/DNA ratios during metamorphosis and settlement, a rearing experiment lasting for 21 days from E to I8 stage (eight days after reaching I stage) was designed and carried out under similar rearing conditions to the previous experiments. To initially reduce individual variance, approximately 3,000 larvae at E stage were carefully selected from the 500-L stocking tanks and transferred into 100-L rearing tanks. Development of Japanese flounder larvae and juveniles was classified into nine developmental stages according to Minami (1982), and its metamorphic process was grouped into three phases (Gwak et al., 1999).
The starvation phase involved 300 fish at each developmental stage from A to E carefully sorted from the three 500-L stocking tanks during Exp.1 and transferred into 100-L tanks. Three hundred fish from the F stage were also selected during the second experiment and transferred into 100-L tanks. The fish were kept in circulated seawater with aeration at 18 C without food. The starvation experiment ended on the day of 100% mortality based on the result of a previous point-of-no-return study by Gwak et al. (1999).
Samplings for fed and starved fish at each developmental stage were done during 43 days from 3 DAH for the fed group and just before the day of 100% mortality for the starved group (Table 1). To determine quantities of DNA and RNA in the entire body, six fish were individually sampled, rinsed, pipetted into Eppendorf micro vials, immediately frozen at -25 C, and stored at -87 C until analysis. All the samplings and preservations for RNA/DNA ratios were made from both fed and starving groups during the rearing experiment. In Exp. 2 the sampling and preservation was done in the same manner.
Table 1. Criterion established by RNA/DNA ratio for determining the nutritional conditions of Japanese flounder larvae and juveniles.
|
Stage |
Body Length (mm) |
Characters |
Metamorphic Phases |
Metamorphosing Stages |
Nutritional Status Dying < starving* < healthy |
|
A |
3.6 |
First feeding |
Premetamorphic |
|
1.48 – 2.15 |
|
B |
4.4 |
|
|
|
1.34 – 2.15 |
|
C |
5.7 |
|
|
|
2.13 – 3.19 |
|
D |
7.4 |
|
|
|
1.16 – 3.50 |
|
E |
7.7 |
Metamorphosis |
Metamorphic |
Early- |
1.56 – 4.03 |
|
F |
8.3 |
|
|
|
1.20 – 2.52 |
|
G |
9.3 |
|
|
Mid- |
1.08 – 3.24 |
|
H |
11.4 |
|
|
Late- |
1.69 – 5.36 |
|
I |
11.6 |
Settlement |
Postmetamorphic |
|
1.35 – 3.78 |
|
* The range of RNA/DNA ratio that can be classified as a starving. |
|||||
To determine the quantities of RNA, DNA, and protein content in the whole body during the third experiment, ten additional fish were sampled and stored until later analysis. For measurements of dry weight individual fish were placed on pre-weighed pieces of foil and dried to a constant weight at 60 C. To obtain a precise value of dry weight, especially for the smallest larvae, freshly activated silica gel was placed in the balance to control for relative hygrometry. A minimal amount of time spent from removal from the desiccator to weighing was controlled strictly.
Field collections were performed in Wakasa Bay, Sea of Japan using a net 1.3 m in diameter and 0.33 mm mesh for the pelagic larvae and a beam trawl (2.0 m mouth width and 4.0 mm mesh) for the settled juveniles during the settling season from March to June in 1994 and 1995. Temperature and salinity were measured at each site with a Yellow Springs International (YSI) SCI Meter 33. A total of 187 larvae and juveniles (Table 2) were analyzed for their individual RNA/DNA ratios. Since tissues of fish larvae deteriorate quickly due to autolysis (Theilacker 1978), individual larvae and juveniles were stored on dry ice immediately after collection. To determine if these animals were in starving condition, RNA/DNA ratios were compared to the values determined from the larvae and juveniles starved under laboratory conditions shown in Table 1. The samples with RNA/DNA ratios below these values were considered "starving."
Table 2. Percentage of starving larvae and juveniles in each sampling date for 1994 and 1995.
|
Sampling Date |
Total Catch |
Stage |
No. |
No. of Starving |
% Starving |
Depth (m) |
Temp (C)
|
|
13 May 1994 |
36 |
C |
11 |
2 |
18 |
20-40 |
17 |
|
|
|
D |
10 |
2 |
20 |
|
|
|
|
|
E |
13 |
0 |
0 |
|
|
|
|
|
G |
2 |
0 |
0 |
|
|
|
20 May |
39 |
B |
4 |
0 |
0 |
20 |
17 |
|
|
|
C |
16 |
0 |
0 |
|
|
|
|
|
D |
7 |
0 |
0 |
|
|
|
|
|
E |
7 |
0 |
0 |
|
|
|
|
|
F |
4 |
0 |
0 |
|
|
|
|
|
G |
1 |
0 |
0 |
|
|
|
6 April 1995 |
1 |
F |
1 |
0 |
0 |
113 |
15 |
|
21 April |
8 |
G |
4 |
0 |
0 |
10 |
16 |
|
|
|
H |
2 |
1 |
50 |
|
|
|
|
|
I |
2 |
1 |
50 |
|
|
|
8 May |
54 |
F |
2 |
0 |
0 |
3.5-10 |
17 |
|
|
|
G |
18 |
0 |
0 |
|
|
|
|
|
H |
19 |
0 |
0 |
|
|
|
|
|
I* |
15 |
1 |
0 |
|
|
|
25 May |
34 |
I |
34 |
22 |
65 |
4.5-5 |
17 |
|
5 June |
15 |
F |
2 |
0 |
0 |
3.5 |
18 |
|
|
|
G |
2 |
0 |
0 |
|
|
|
|
|
I |
11 |
10 |
91 |
|
|
|
* I stage fish that are newly or recently settled.
|
|||||||
The quantity of RNA and DNA in the whole body from A to E stage was determined individually by using a specific nucleic acid fluorescent dye, Ethidium Bromide, developed by Clemmesen (1993), and slightly modified by Sato et al. (1995). In F stage, nucleic acids were extracted from the whole body by homogenizing the larvae and juveniles in Tris-HCl buffer (0.05 M Tris, 0.1 M NaCl, 0.01 M EDTA, pH 8.0), using a glass homogenizer placed in 4 C ice-cold water. In order to measure the DNA content of a sample, RNA was enzymatically digested with RNase and the remaining DNA was determined with Ethidium Bromide. Salmon sperm DNA (Wako Pure Chem. Co., Ltd.) and yeast RNA (Kanto Chem. Co., Ltd.) were used as standards.
A Bio-Rad protein kit, using bovine serum albumin as a standard determined total protein dissolved in NaOH. Expressed as µg of protein per fish, the ratio of RNA to protein and protein to DNA are cited as indices of protein synthesis capacity and cell size, respectively (Mathers et al., 1994). A one-way ANOVA (Fisher) was used for statistical evaluation. Significance was accepted for P<0.05.
Results
Figure 1 shows the developmental changes in RNA and DNA contents obtained from the Exp. 1. RNA and DNA contents of fed larvae increased with age, although the values largely fluctuated at G, H, and I stages. In Exp. 2, DNA contents increased gradually with age and showed a small peak just after settlement (on 34 DAH). The RNA content showed a drastic increase between the mid and late metamorphic stages (G to H), but almost no increment between early and mid metamorphic stages (F to G). The RNA content decreased between post-metamorphic phase (I stage) and 39 DAH, but repeatedly increased thereafter (Fig. 2).
Figure 1. Developmental changes in RNA and DNA contents in fedlarvae and juveniles of laboratory-reared Japanese flounder. Data pointsare mean values of six fish. A to I indicate the developmental stage.
Figure 2. Ontogeneticchanges in RNA andDNA contents of lab-oratory-reared Japaneseflounder larvae andjuveniles during meta-morphosis (supplemental2nd experiment). Datapoints are mean values ofsix fish. Vertical barsdenote standard deviation,and F to I represent thedevelopmental stage.
In Exp. 3, dry weight of larvae and early juveniles increased exponentially with development, enlarging individual variance in I stage (Fig. 3). These results indicate that changes in RNA and DNA content during metamorphosis were similar to those of Exp.2 (Fig. 4a). Ontogenetic changes in DNA and RNA content in terms of µg/mg DW (Fig. 4b) showed a very different pattern from those individually. The DNA content (µg/mg DW) at the early and mid stage appeared rather stable compared to the RNA content having an evident peak. Then both DNA and RNA contents showed a marked decrease until the post-metamorphic phase (I stage) before stabilizing again.
Figure 3. Developmental changes in dry weight (mg) of Japaneseflounder larvae and juveniles during metamorphosis and early post-metamorphic phase (supplemental 3rd experiment). Values are givenas the mean ± SD of twenty-five to thirty fish. E to I indicatedevelopmental stage.
Figure 4a. Developmentalchanges in DNA and RNAcontents of Japaneseflounder larvae and juve-niles during metamorpho-sis and early postmeta-morphic phase (supple-mental 3rd experiment) in:g/ind. (A) and :g/mg DW(B). Values are given asthe mean ± SD of five toeight fish. E to I indicatedevelopmental stage.
The protein content, as µg/ind., showed an overall increase between the early and late metamorphic stages, then stabilizing until reaching the I2 stage (A in Fig. 5). After the post-metamorphic phase, the protein content of newly settled juveniles showed a drastic increase. A significant increase in protein content, as µg/mg DW, between the early and mid metamorphic stages was followed by a consistent decrease until the post-metamorphic phase (B in Fig. 5). Thereafter the protein content showed a gradual increase.
Figure 4b. Developmental changes in DNA and RNAcontents ofJapanese flounder larvae and juveniles during metamorphosis andearly post-metamorphic phase (supplemental 3rdexperiment) in:g/ind. (A) and :g/mg DW (B). Values are given as the mean ± SD offive to eight fish. E to I indicate developmental stage.
Figure 6 illustrates the relative amounts of DNA of the fed and starved larvae, with variability during development: lower in the fed larvae at D, E and H stages; higher at F, G, and I stages; and similar at A, B and C stages. The RNA content of the fed larvae exponentially increased with development, particularly accelerating at later phases of metamorphosis (G and H stages, Fig. 7). In contrast, the RNA contents in the starved larvae showed drastic reduction throughout the experiment with the onset of food deprivation. The rate of daily reduction appeared to be higher during the earlier days of starvation. Difference in RNA contents between fed and starved groups significantly increased as starvation proceeded, contrasting with DNA content that increased under starvation at several developmental stages.
Figure 5. Developmental changes in protein content of Japaneseflounder larvae and juveniles during metamorphosis and early post-metamorphic phase (supplemental 3rd experiment) in :g/ind. (A) and:g/mg DW (B). Values are given as the mean ± SD of five to eightfish. E to I indicate developmental stage.
Figure 6. Developmentalchanges in DNA content offed larvae and juveniles,and effects of starvation onthe content in 1st (A) and2nd (B) laboratory-rearedJapanese flounder. Eachpoint is the mean value ofsix fish. Vertical barsdenote standard deviation,and A to I represent thedevelopmental stage.
Figure 7. Developmentalchanges in RNA content offed larvae and juveniles,and effects of starvation onthe content in 1st (A) and2nd (B) laboratory-rearedJapanese flounder. Eachpoint is the mean value ofsix fish. Vertical barsdenote standard deviation,and A to I represent thedevelopmental stage.
RNA: DNA, Protein: DNA, and RNA: Protein
The RNA: DNA for the fed group in Exp.1 showed, during the pre-metamorphic phase (A-E stages), a prominent increase between day 8 and 14, followed by a fluctuation until day 17 of D stage, and then reached a relatively steady level by day 22 of F stage (Fig. 8A). The RNA: DNA exhibited a marked fluctuation depending on developmental stage or day during the metamorphic (F to H) and post-metamorphic phases (I). The RNA: DNA obtained in Exp.2 showed a more stable pattern (Fig. 8B). It increased slowly between early and mid metamorphic stages (F and G), and reached the highest value of 5.36 ± 0.62 at the H stage. Thereafter, the value dropped to 2.49 ± 0.14 (I5 stage: 5 days post-settlement), and then increased to 3.08 ± 0.25 at I8. During larval starvation the ratio dropped consistently at every stage. For example, at the D stage it fell from 3.50 to 1.16 for five days, corresponding to 50% larval mortality (Fig. 8A).
Figure 8. Developmental changes in RNA/DNA ratios of laboratory-reared Japanese flounder larvae and juveniles and changes in theratios induced by starvation. A: 1st experiment, B: 2nd experiment.Vertical bars denote standard deviation, and A to I represent thedevelopmental stage.
In Exp.3, RNA: DNA showed two peaks that occurred after onset of metamorphosis and at metamorphic climax stage H with the highest value of 5.07 ± 0.66 (Fig. 9). The RNA: DNA drastically dropped to 2.41 ± 0.85 at I6 stage, and then tended to increase again. A gradual increase in DNA content versus a stable level of RNA content between late metamorphic and I6 stages (Fig. 4A), caused an overall significant decrease in RNA: DNA. However, it increased again from I6 stage with a relatively higher increase in RNA.
Protein: DNA also peaked at I stage resulting mainly from a higher rate of increase in protein content. The ratio then decreased markedly until the completion of metamorphosis, probably due to a slow increase in protein content, and a higher increase in DNA content (Fig. 10). Protein: RNA showed a drastic decrease at the early metamorphic stage and remained constant between mid and late metamorphic stages, followed by a slight decrease at post-metamorphic (Fig. 10).
Figure 9. Developmental changes in RNA/DNA ratios ofJapanese flounder larvae and juveniles during metamorphosis andearly postmetamorphic phase (supplemental 3rd experiment).Values are given as the mean ±SD of five to eight fish. E to Iindicate developmental stage.
Figure 10. Developmental changes in protein/DNA andRNA/protein ratios of Japanese flounder larvae and juvenilesduring metamorphosis and early postmetamorphic phase(supplemental 3rd experiment). Values are given as the mean ±SD of five to eight fish. E to I indicate developmental stage.
Table 1 shows the nutritional criteria for evaluating the conditions of wild fish established by RNA/DNA ratios in laboratory rearing experiments. Each were classified either "healthy," if the RNA: DNA was as high as the well-fed hatchery-reared fish, "starving," if the RNA/DNA ranged between that of the well-fed and starved fish during the point-of-no-return (50% mortality), or "dying," if the ratio was below that of the point-of-no-return fish.
The RNA: DNA for wild larvae and juveniles are shown in Fig. 11. Forty-eight pre-metamorphic larvae (B-D stages) were caught in coastal waters from 20 to 113m in depth and 39 late metamorphic larvae and juveniles were caught in the near-shore water ranging from 3.5 to 10m (Table 2). Although individual values varied, the trend indicates a developmental stage-dependent increase in RNA: DNA until H stage, followed by a decrease at I stage. RNA: DNA differed significantly between developmental stages (Fig. 11B, P<0.0001). Tukey means comparisons indicated that stage H, with the highest RNA: DNA differed significantly from all other stages, and that stage G also differed significantly from stage I. The ratios of pre-metamorphic phase larvae ranged from 2.7 to 9.4 with an increase in median value at each stage during the two cruises in 1994 (Fig. 11A). Developmental stages differed significantly in their (P=0.002). Tukey means comparisons indicated that stage B, with the lowest RNA: DNA, differed significantly from stages E and G, which had the highest ratios, and that stage C also differed significantly from stage E. The general pattern of changes in RNA: DNA for the metamorphic wild larvae was similar to that of the hatchery-reared fish (Fig. 11B). Of the 75 larvae (between C and G stages) collected in 1994, four C and D stage larvae were identified as "starving". Fish collected in 1995 consisted of advanced-stage (G and H stages) larvae and juveniles, but a relatively higher percentage of them considered "starving" (Table 2). The "starving" percentage (54%) at I stage was particularly high. The temperature at each sampling site ranged from 15-16 C in April 1995 to 17-18 C in May and June of 1995 (Table 2).